| 职 称 | 教授 |
科研方向 | 林木基因组和生物信息学 | |
招生专业 | 林学（硕士、博士） | |
联系方式 | 0538-8247797 /Email：liuyunlong@sdau.edu.cn | |
个人简介 | ||
刘云龙，博士，教授，博士生导师，主要从事重要林木和资源植物的基因资源挖掘与种质创新研究，聚焦多倍化在被子植物（特别是禾本科）创新性状形成和物种演化中的关键作用机制。相关成果发表于Nature Genetics、Plant Cell、PNAS、Plant Physiology 、Molecular Plant 等国际主流学术期刊。先后主持国家自然科学基金项目、云南省基础研究专项面上项目；参与国家自然科学基金联合基金、中国科学院战略性先导科技专项B类等重大科研任务。曾获海南省自然科学一等奖。 | ||
教学背景及工作经历 | ||
教育背景： 2006.9 - 2013.7, 中国科学院大学, 昆明植物研究所，植物学, 博士 2001.9 - 2005.6, 四川大学, 生命科学学院，生物技术, 学士 工作经历： 2025.5 至 今, 山东农业大学, 林学院, 教授 2022.2 至 2025.5, 中国科学院昆明植物研究所, 中国西南野生生物种质资源库, 副研究员 2014.1 至2022.2, 中国科学院昆明植物研究所, 中国西南野生生物种质资源库, 助理研究员 2012.9 至 2013.12, 中国科学院昆明植物研究所, 中国西南野生生物种质资源库, 研究实习员 | ||
个人荣誉\称号 | ||
海南省自然科学奖一等奖，省部级，2024.09 | ||
教学工作 | ||
曾承担博士研究生《生物信息学》等课程的教学工作 | ||
研究方向 | ||
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科研项目 | ||
1.云南省基础研究专项面上项目，巨龙竹快速生长和秆型分化分子机制解析，2021-2024，主持。 2.云南省中青年学术和技术带头人后备人才项目，2024-2028（调离云南项目中止），主持。 3.国家自然科学基金委员会，青年科学基金项目,利用二代测序和BAC-FISH方法进行8个稻属AA-基因组节段重复的研究，2016-2018，主持。 4.云南省生物资源数字化开发应用，课题竹类植物资源数字化建设，2022-2023，主持 5.中国科学院战略性先导科技专项（B类），XDB31000000，大尺度区域生物 多样性格局与生命策略，子课题，全基因组加倍与植物的辐射演化，2019-2024，参加 6.国家自然科学基金委员会，联合基金项目栽培茶树的起源与驯化研究，2020-2024，参加。 | ||
代表性科研论文 | ||
(1) Ma Peng-Fei#; Liu Yun-Long#; Guo Cen#; Jin Guihua#; Guo Zhen-Hua#; Mao Ling; Yang Yi-Zhou; Niu Liang-Zhong; Wang Yu-Jiao; Clark Lynn G.; Kellogg Elizabeth A.; Xu Zu-Chang; Ye Xia-Ying; Liu Jing-Xia; Zhou Meng-Yuan; Luo Yan; Yang Yang; Soltis Douglas E.; Bennetzen Jeffrey L.; Soltis Pamela S.; Li De-Zhu*，Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance，Nature Genetics, 2024, 56(4): 710–720. IF：30.8 (2) Liu Yun-Long#*; Gao Shu-Yang#; Jin Guihua#; Zhou Meng-Yuan#; Gao Qijuan#; Guo Cen; Yang Yi-Zhou; Niu Liang-Zhong; Xia Enhua; Guo Zhen-Hua; Ma Peng-Fei*; Li De-Zhu*. BambooBase：A comprehensive database of bamboo omics and systematics, Molecular Plant, 2024, 17(5): 682–685. IF：27.5 (3) Liu Jie#; Zhou Shi-Zhao#; Liu Yun-Long#; Zhao Bin-Yan#; Yu Dongmei; Zhong Mi-Cai; Jiang Xiao-Dong; Cui Wei-Hua; Zhao Jiu-Xia; Qiu Juan; Liu Liang-Min; Guo Zhen-Hua; Li Hong-Tao; Tan Dun-Yan; Hu Jin-Yong*; Li De-Zhu*. Genomes of Meniocus linifolius and Tetracme quadricornis reveal the ancestral karyotype and genomic features of core Brassicaceae. Plant Communications, 2024: 100878. IF：10.5 (4) Ma Peng-Fei#; Liu Yun-Long#; Jin Gui-Hua; Liu Jing-Xia; Wu Hong; He Jun; Guo Zhen-Hua; Li De-Zhu*, The Pharus latifolius genome bridges the gap of early grass evolution, Plant Cell, 2021, 33(4): 846–864. IF：11.6 (5) Gao, Li-Zhi#*; Liu, Yun-Long#; Zhang, Dan#; Li, Wei#; Gao, Ju; Liu, Yuan; Li, Kui; Shi, Chao; Zhao, Yuan; Zhao, You-Jie; Jiao, Jun-Ying; Mao, Shu-Yan; Gao, Cheng-Wen; Eichler, Evan E; Evolution of Oryza chloroplast genomes promoted adaptation to diverse ecological habitats., Communications Biology 2019, 2: 278. IF：5.9 (6) Guo, Zhen Hua#; Ma, Peng Fei#; Yang, Guo Qian#; Hu, Jin Yong#; Liu, Yun Long#; Xia, En-Hua; Zhong, Mi-Cai; Zhao, Lei; Sun, Gui-Ling; Xu, Yu-Xing; Zhao, You-Jie; Zhang, Yi-Chi; Zhang, Yu-Xiao; Zhang, Xue-Mei; Zhou, Meng-Yuan; Guo, Ying; Guo, Cen; Liu, Jing-Xia; Ye, Xia-Ying; Chen, Yun-Mei; Yang, Yang; Han, Bin; Lin, Choun-Sea*; Lu, Ying*; Li, De-Zhu*; Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos., Molecular Plant, 2019, 12(10): 1353-1365. IF：27.5 (7) Zhang, Qun-Jie#; Zhu, Ting#; Xia, En-Hua#; Shi, Chao#; Liu, Yun-Long#; Zhang, Yun#; Liu, Yuan#; Jiang, Wen-Kai; Zhao, You-Jie; Mao, Shu-Yan; Zhang, Li-Ping; Huang, Hui; Jiao, Jun-Ying; Xu, Ping-Zhen; Yao, Qiu-Yang; Zeng, Fan-Chun; Yang, Li-Li; Gao, Ju; Tao, Da-Yun; Wang, Yue-Ju; Bennetzen, Jeffrey L.*; Gao, Li-Zhi*; Rapid diversification of five Oryza AA genomes associated with rice adaptation, PNAS, 2014, 111(46): E4954-E4962. IF：11.1 (8) Jiang, Wen-kai#; Liu, Yun-Long#; Xia, En-hua; Gao, Li-zhi*; Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants., Plant Physiology, 2013, 161(4): 1844-1861. IF：7.4 其他： [1]Ya Ji-Dong; Wang Wan -Ting; Liu Yun-Long; Jiang Hong; Han Zhou-Dong; Zhang Ting; Huang Hua; Cai Jie; Li De-Zhu. Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence. PHYTOKEYS, 2023(235): 211–236. IF：1.4 [2]Guo Cen; Ma Peng-Fei; Yang Guo-Qian; Ye Xia-Ying; Guo Ying; Liu Jing-Xia; Liu Yun-Long; Eaton Deren A. R.; Guo Zhen-Hua; Li De-Zhu. Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos. SYSTEMATIC BIOLOGY, 2021, 70(4): 756–773. IF：6.5 [3]Xia Enhua; Tong Wei; Hou Yan; An Yanlin; Chen Linbo; Wu Qiong; Liu Yunlong; Yu Jie; Li Fangdong; Li Ruopei; Li Penghui; Zhao Huijuan; Ge Ruoheng; Huang Jin; Mallano Ali Inayat; Zhang Yanrui; Liu Shengrui; Deng Weiwei; Song Chuankui; Zhang Zhaoliang; Zhao Jian; Wei Shu; Zhang Zhengzhu; Xia Tao; Wei Chaoling; Wan Xiaochun. The Reference Genome of Tea Plant and Resequencing of 81 Diverse Accessions Provide Insights into Its Genome Evolution and Adaptation[J]. MOLECULAR PLANT, 2020, 13(7): 1013–1026. IF：27.5 [4]Shi Cong; Li Wei; Zhang Qun-Jie; Zhang Yun; Tong Yan; Li Kui; Liu Yun-Long; Gao Li-Zhi. The draft genome sequence of an upland wild rice species, Oryza granulata. SCIENTIFIC DATA, 2020, 7(1). IF：9.8 [5]Liu Jin; Shi Cong; Shi Cheng-Cheng; Li Wei; Zhang Qun-Jie; Zhang Yun; Li Kui; Lu Hui-Fang; Shi Chao; Zhu Si-Tao; Xiao Zai-Yun; Nan Hong; Yue Yao; Zhu Xun-Ge; Wu Yu; Hong Xiao-Ning; Fan Guang-Yi; Tong Yan; Zhang Dan; Mao Chang-Li; Liu Yun-Long; Hao Shi-Jie; Liu Wei-Qing; Lv Mei-Qi; Zhang Hai-Bin; Liu Yuan; Hu-tang Ge-Ran; Wang Jin-Peng; Wang Jia-Hao; Sun Ying-Huai; Ni Shu-Bang; Chen Wen-Bin; Zhang Xing-Cai; Jiao Yuan-Nian; Eichler Evan E.; Li Guo-Hua; Liu Xin; Gao Li-Zhi. The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis. MOLECULAR PLANT, 2020, 13(2): 336–350. IF：27.5 [6]Li Wei; Zhang Qun-Jie; Zhu Ting; Tong Yan; Li Kui; Shi Cong; Zhang Yun; Liu Yun-Long; Jiang Jian-Jun; Liu Yuan; Xia En-Hua; Huang Hui; Zhang Li-Ping; Zhang Dan; Shi Chao; Jiang Wen-Kai; Zhao You-Jie; Mao Shu-Yan; Jiao Jun-ying; Xu Ping-Zhen; Yang Li-Li; Gao Li-Zhi. Draft genomes of two outcrossing wild rice, Oryza rufipogon and O. longistaminata, reveal genomic features associated with mating-system evolution. PLANT DIRECT, 2020, 4(6). IF：3.0 [7]Li Wei; Li Kui; Huang Ying; Shi Cong; Hu Wu-Shu; Zhang Yun; Zhang Qun-Jie; Xia En-Hua; Hutang Ge-Ran; Zhu Xun-Ge; Liu Yun-Long; Liu Yuan; Tong Yan; Zhu Ting; Huang Hui; Zhang Dan; Zhao Yuan; Jiang Wen-Kai; Yuan Jie; Niu Yong-Chao; Gao Cheng-Wen; Gao Li-Zhi. SMRT sequencing of the Oryza rufipogon genome reveals the genomic basis of rice adaptation. COMMUNICATIONS BIOLOGY, 2020, 3(1). IF：5.9 [8]Li Wei; Li Kui; Zhang Qun-jie; Zhu Ting; Zhang Yun; Shi Cong; Liu Yun-long; Xia En-hua; Jiang Jian-jun; Shi Chao; Zhang Li-ping; Huang Hui; Tong Yan; Liu Yuan; Zhang Dan; Zhao Yuan; Jiang Wen-kai; Zhao You-jie; Mao Shu-yan; Jiao Jun-ying; Xu Ping-zhen; Yang Li-li; Yin Guo-ying; Gao Li-zhi. Improved hybrid de novo genome assembly and annotation of African wild rice, Oryza longistaminata, from Illumina and PacBio sequencing reads. PLANT GENOME, 2020, 13(1). IF：4.2 [9]Xia En-Hua; Zhang Hai-Bin; Sheng Jun; Li Kui; Zhang Qun-Jie; Kim Changhoon; Zhang Yun; Liu Yuan; Zhu Ting; Li Wei; Huang Hui; Tong Yan; Nan Hong; Shi Cong; Shi Chao; Jiang Jian-Jun; Mao Shu-Yan; Jiao Jun-Ying; Zhang Dan; Zhao Yuan; Zhao You-Jie; Zhang Li-Ping; Liu Yun-Long; Liu Ben-Ying; Yu Yue; Shao Sheng-Fu; Ni De-Jiang; Eichler Evan E.; Gao Li-Zhi. The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis. MOLECULAR PLANT, 2017, 10(6): 866–877. IF：27.5 [10]Xia En-Hua; Yang Da-Rong; Jiang Jian-Jun; Zhang Qun-Jie; Liu Yuan; Liu Yun-Long; Zhang Yun; Zhang Hai-Bin; Shi Cong; Tong Yan; Kim Changhoon; Chen Hua; Peng Yan-Qiong; Yu Yue; Zhang Wei; Eichler Evan E.; Gao Li-Zhi. The caterpillar fungus, Ophiocordyceps sinensis, genome provides insights into highland adaptation of fungal pathogenicity. SCIENTIFIC REPORTS, 2017, 7. IF：4.6 | ||
